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Japanese joins ranks of sequenced genomes

Monday, 25 October 2010
Agence France-Presse
Craig Venter

An unnamed Japanese man has joined U.S. biotech tycoon, Craig Venter (pictured), as one of the few humans whose genetic code has been fully sequenced.

Credit: DPA/AFP

PARIS: A Japanese has joined the elite club of humans whose genetic code has been fully sequenced, according to research unveiled last week.

The unnamed male gave a sample of DNA which has been unravelled to show all three billion base pairs, or ‘letters’ in the double-helix code for life. Six other genomes are reported to have been fully sequenced since 2001.

They comprise the genomes of James Watson, who co-discovered the structure of DNA; Craig Venter, a U.S. biotech tycoon; a male of the Yoruba ethnicity of western Africa; two Korean males; and a male of Han Chinese ethnicity.

Undiscovered pieces of the human genome

The study, published online in the specialist journal Nature Genetics, is headed by Tatsuhiko Tsunoda of the Centre for Genomic Medicine in Yokohama.

An international research consortium has launched the so-called ‘Thousand Genomes Project’ aimed at fully sequencing the genomes of 1,000 anonymous individuals and placing the data in the public domain.

“Our analysis suggests that considerable variation remains undiscovered in the human genome and that whole-genome sequencing is an invaluable tool for obtaining a complete understanding of human genetic variation,” the researchers wrote in the paper.

Tailoring drugs using sequencing

The project aims at shedding light on genetic variations that can explain inherited vulnerability to disease, tailor drugs to individual needs and help explain the odyssey of human migration.

“Whole-genome sequencing can identify unknown variations associated with complex diseases and provide new insight into such diseases,” said the study.

Tsunoda said he was cautious about making any early comparison between the Japanese and the other known genomes, as the seven sequencing projects used different methods to unravel the DNA and analyse it. "More samples - dozens - would be necessary, which is our future plan," he said.

Tsunoda said his team were working on new ways to spot patterns of multiple variations in the gene code. "In the future, we would be able to find a huge number of variations in individual genomes that should be related to many diseases," he said.

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